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UG3TR004713

Cooperative Agreement

Overview

Grant Description
A non-viral CRISPR-mediated genome editing delivery platform as a potential therapy for neurogenetic diseases - Genome editing holds great promise for the treatment of many genetic diseases; however, its application in the clinic has been slow due to the lack of safe delivery tools and significant cost and time investment required to custom-develop individual therapies.

In our SCGE program phase 1 study, we developed a chemically modified ribonucleoprotein (CRNP)-based gene delivery system that specifically targets neuronal cells throughout the brain after intrathecal (IT) administration.

The overarching goal of this application is to apply this novel gene editing technology towards the treatment of two severe neurodevelopmental disorders (NDD): Angelman syndrome (AS) and H1-4 syndrome (HIST1H1E syndrome).

AS is a devastating neurodevelopmental disease caused by the deficiency of the maternal and brain-specific imprinting UBE3A gene in human chromosome 15q11-q13 region. The structure of UBE3A is intact in the paternal chromosome in all AS cases but transcriptionally repressed by a non-coding and antisense RNA of UBE3A (UBE3A-ATS) mediated mechanism. It has been shown convincingly that reduction of UBE3A-ATS by antisense oligo (ASO), topoisomerase inhibitors, and virus-delivered CAS9 gene editing can de-repress the expression of UBE3A and correct the abnormal neurological phenotypes in AS mouse models.

H1-4 syndrome is caused by a gain of function mechanism due to a mutated protein with aberrant C-terminal frameshift tail (CFT). H1-4 syndrome has similar but milder clinical features than AS. There is no effective intervention for H1-4 syndrome. Thus, a long-term molecular therapy for AS and H1-4, as well as other NDDs, is urgently needed.

In our preclinical study using a well-validated AS mouse model, we demonstrated that a single IT delivery of UBE3A antisense-targeting RNP/CAS9 efficiently de-represses the expression of UBE3A from the paternal chromosome, leading to correction of neurobehavioral phenotypes. Similarly, the knockdown of H1-4 CFT rescues the abnormal phenotypes in H1-4 humanized mice.

We propose our CRNP-based platform for the treatment of AS and H1-4 syndrome utilizing the same genome editor (CRISPR), delivery system (CRNPs), route (IT), target cell type (neurons), therapeutic mechanism (genetic inactivation), and overall trial design.

We have assembled an outstanding team from Yale and Rush University with strong and complementary expertise in the areas of preclinical, IND enabling studies, and clinical trials. The success of this study will lead to the first-ever gene editing-based therapy for AS and H1-4. More importantly, it will support a paradigm shift for genome editing; rapidly expanding the number of neurogenetic diseases treated by in vivo gene editing and accelerating the transition of genome editing technology into clinical applications.
Awardee
Funding Goals
NOT APPLICABLE
Place of Performance
New Haven, Connecticut 065103206 United States
Geographic Scope
Single Zip Code
Analysis Notes
Amendment Since initial award the total obligations have increased 429% from $5,019,038 to $26,526,303.
Yale Univ was awarded Non-Viral CRISPR-Mediated Genome Editing for Neurogenetic Diseases Cooperative Agreement UG3TR004713 worth $26,526,303 from the National Institute of Allergy and Infectious Diseases in September 2023 with work to be completed primarily in New Haven Connecticut United States. The grant has a duration of 2 years 10 months and was awarded through assistance program 93.310 Trans-NIH Research Support. The Cooperative Agreement was awarded through grant opportunity Platform Clinical Trials of Genome Editors in Multiple Diseases (UG3/UH3, Clinical Trial Required).

Status
(Ongoing)

Last Modified 8/6/25

Period of Performance
9/20/23
Start Date
7/31/26
End Date
67.0% Complete

Funding Split
$26.5M
Federal Obligation
$0.0
Non-Federal Obligation
$26.5M
Total Obligated
100.0% Federal Funding
0.0% Non-Federal Funding

Activity Timeline

Interactive chart of timeline of amendments to UG3TR004713

Transaction History

Modifications to UG3TR004713

Additional Detail

Award ID FAIN
UG3TR004713
SAI Number
UG3TR004713-899379432
Award ID URI
SAI UNAVAILABLE
Awardee Classifications
Private Institution Of Higher Education
Awarding Office
75NR00 NIH National Center for Advancing Translational Sciences
Funding Office
75NA00 NIH OFFICE OF THE DIRECTOR
Awardee UEI
FL6GV84CKN57
Awardee CAGE
4B992
Performance District
CT-03
Senators
Richard Blumenthal
Christopher Murphy

Budget Funding

Federal Account Budget Subfunction Object Class Total Percentage
Office of the Director, National Institutes of Health, Health and Human Services (075-0846) Health research and training Grants, subsidies, and contributions (41.0) $5,019,038 100%
Modified: 8/6/25