R01MH129855
Project Grant
Overview
Grant Description
Statistical Approaches to Improving Functional Connectivity Estimates with an Application to Autism - Abstract
Functional magnetic resonance imaging (fMRI) is used to estimate the correlations between brain regions. Despite the many insights into brain function provided by fMRI, the field is currently experiencing a reproducibility crisis. For instance, Autism Spectrum Disorder (ASD) is thought to be the result of disordered brain connections, but the ASD literature contains conflicting reports of both hypo- and hyper-connectivity.
Participant head motion is a crucial factor, and the exclusion of high-motion participants can reduce the impacts of motion. However, motion quality control removes more than 50% of data in pediatric fMRI studies. In ASD, the most severely impaired children tend to be removed, resulting in a characterization of only a limited part of the autism spectrum.
In addition, methodological development and empirical studies have focused on functional connectivity measured at rest. Children move less during some tasks, such as watching a movie. Dynamic connectivity during a task may offer crucial insights into diseases of brain connectivity with larger effect sizes, but popular methods do not utilize task information during model fitting.
The overall objective of this grant is to develop statistical methods that decrease bias and improve efficiency in functional connectivity studies. Our proposal is motivated by a resting-state fMRI study on ASD with hundreds of children from the Kennedy Krieger Institute and Johns Hopkins University. We will assess external validity in an independent test dataset that will be collected at the Marcus Autism Center and Emory University, where we will also conduct a study of engagement during a movie with social interactions.
To achieve our objective, we propose the following:
1) Develop a missing data method for deconfounding to reveal functional connectivity signatures of ASD. This aim addresses sampling biases due to motion quality control.
2) Develop a causal mediation framework for signal decomposition of functional connectivity and motion. This aim will be used to disentangle neural versus motion contributions to function connectivity in ASD.
3) Develop a novel covariance regression model for dynamic functional connectivity during a task. This aim will test the scientific hypothesis that the neural underpinnings of engagement differ in children with ASD compared to typically developing children.
We will develop software so that the proposed methods can be broadly applied to neuroimaging studies, including neurological disorders and mental health. Completing these aims will 1) provide tools that will improve reproducibility in functional connectivity studies and 2) reveal the neural underpinnings of ASD. This can aid in the development of treatments and educational strategies.
Functional magnetic resonance imaging (fMRI) is used to estimate the correlations between brain regions. Despite the many insights into brain function provided by fMRI, the field is currently experiencing a reproducibility crisis. For instance, Autism Spectrum Disorder (ASD) is thought to be the result of disordered brain connections, but the ASD literature contains conflicting reports of both hypo- and hyper-connectivity.
Participant head motion is a crucial factor, and the exclusion of high-motion participants can reduce the impacts of motion. However, motion quality control removes more than 50% of data in pediatric fMRI studies. In ASD, the most severely impaired children tend to be removed, resulting in a characterization of only a limited part of the autism spectrum.
In addition, methodological development and empirical studies have focused on functional connectivity measured at rest. Children move less during some tasks, such as watching a movie. Dynamic connectivity during a task may offer crucial insights into diseases of brain connectivity with larger effect sizes, but popular methods do not utilize task information during model fitting.
The overall objective of this grant is to develop statistical methods that decrease bias and improve efficiency in functional connectivity studies. Our proposal is motivated by a resting-state fMRI study on ASD with hundreds of children from the Kennedy Krieger Institute and Johns Hopkins University. We will assess external validity in an independent test dataset that will be collected at the Marcus Autism Center and Emory University, where we will also conduct a study of engagement during a movie with social interactions.
To achieve our objective, we propose the following:
1) Develop a missing data method for deconfounding to reveal functional connectivity signatures of ASD. This aim addresses sampling biases due to motion quality control.
2) Develop a causal mediation framework for signal decomposition of functional connectivity and motion. This aim will be used to disentangle neural versus motion contributions to function connectivity in ASD.
3) Develop a novel covariance regression model for dynamic functional connectivity during a task. This aim will test the scientific hypothesis that the neural underpinnings of engagement differ in children with ASD compared to typically developing children.
We will develop software so that the proposed methods can be broadly applied to neuroimaging studies, including neurological disorders and mental health. Completing these aims will 1) provide tools that will improve reproducibility in functional connectivity studies and 2) reveal the neural underpinnings of ASD. This can aid in the development of treatments and educational strategies.
Awardee
Funding Goals
THE MISSION OF THE NATIONAL INSTITUTE OF MENTAL HEALTH (NIMH) IS TO TRANSFORM THE UNDERSTANDING AND TREATMENT OF MENTAL ILLNESSES THROUGH BASIC AND CLINICAL RESEARCH, PAVING THE WAY FOR PREVENTION, RECOVERY, AND CURE. WE FULFILL THIS MISSION BY SUPPORTING AND CONDUCTING RESEARCH ON MENTAL ILLNESSES, HEALTH SERVICES, AND THE UNDERLYING BASIC SCIENCE OF THE BRAIN AND BEHAVIOR; SUPPORTING THE TRAINING OF SCIENTISTS TO CARRY OUT BASIC AND CLINICAL MENTAL HEALTH RESEARCH; AND COMMUNICATING WITH SCIENTISTS, PATIENTS, PROVIDERS, AND THE PUBLIC ABOUT MENTAL HEALTH RESEARCH ADVANCES AND PRIORITIES. IN MAY 2024, NIMH RELEASED ITS STRATEGIC PLAN FOR RESEARCH. THE STRATEGIC PLAN BUILDS ON THE SUCCESSES OF PREVIOUS NIMH STRATEGIC PLANS BY PROVIDING A FRAMEWORK FOR SCIENTIFIC RESEARCH AND EXPLORATION, AND ADDRESSING NEW CHALLENGES IN MENTAL HEALTH.THE NEW STRATEGIC PLAN OUTLINES FOUR HIGH-LEVEL GOALS: GOAL 1: DEFINE THE BRAIN MECHANISMS UNDERLYING COMPLEX BEHAVIORS GOAL 2: EXAMINE MENTAL ILLNESS TRAJECTORIES ACROSS THE LIFESPAN GOAL 3: STRIVE FOR PREVENTION AND CURES GOAL 4: STRENGTHEN THE PUBLIC HEALTH IMPACT OF NIMH-SUPPORTED RESEARCH THESE FOUR GOALS FORM A BROAD ROADMAP FOR THE INSTITUTES RESEARCH PRIORITIES OVER THE NEXT FIVE YEARS, BEGINNING WITH THE FUNDAMENTAL SCIENCE OF THE BRAIN AND BEHAVIOR, AND EXTENDING THROUGH EVIDENCE-BASED SERVICES THAT IMPROVE PUBLIC HEALTH OUTCOMES.
Grant Program (CFDA)
Awarding / Funding Agency
Place of Performance
Atlanta,
Georgia
30322
United States
Geographic Scope
Single Zip Code
Related Opportunity
Analysis Notes
Amendment Since initial award the total obligations have increased 402% from $702,158 to $3,523,863.
Emory University was awarded
Statistical Methods for ASD Functional Connectivity
Project Grant R01MH129855
worth $3,523,863
from the National Institute of Mental Health in April 2022 with work to be completed primarily in Atlanta Georgia United States.
The grant
has a duration of 5 years and
was awarded through assistance program 93.242 Mental Health Research Grants.
The Project Grant was awarded through grant opportunity NIH Research Project Grant (Parent R01 Clinical Trial Not Allowed).
Status
(Ongoing)
Last Modified 4/20/26
Period of Performance
4/1/22
Start Date
3/31/27
End Date
Funding Split
$3.5M
Federal Obligation
$0.0
Non-Federal Obligation
$3.5M
Total Obligated
Activity Timeline
Subgrant Awards
Disclosed subgrants for R01MH129855
Transaction History
Modifications to R01MH129855
Additional Detail
Award ID FAIN
R01MH129855
SAI Number
R01MH129855-2733280517
Award ID URI
SAI UNAVAILABLE
Awardee Classifications
Private Institution Of Higher Education
Awarding Office
75N700 NIH National Institute of Mental Health
Funding Office
75N700 NIH National Institute of Mental Health
Awardee UEI
S352L5PJLMP8
Awardee CAGE
2K291
Performance District
GA-05
Senators
Jon Ossoff
Raphael Warnock
Raphael Warnock
Budget Funding
| Federal Account | Budget Subfunction | Object Class | Total | Percentage |
|---|---|---|---|---|
| National Institute of Mental Health, National Institutes of Health, Health and Human Services (075-0892) | Health research and training | Grants, subsidies, and contributions (41.0) | $1,408,443 | 100% |
Modified: 4/20/26