R01AI193160
Project Grant
Overview
Grant Description
Microbial programming of T-cell migration from gut to brain - Project summary
The gut-brain axis is emerging as a central mediator of health and disease.
Multiple studies have associated gut microbiota composition with neuroinflammatory and neurodegenerative diseases, and several recent studies suggest trafficking of immune cells from the gut to the brain.
However, mechanistic understanding of how gut-educated T-cells get to the brain and why this axis exists at all are unclear.
We recently discovered that CD4 T-cells are present in mouse and human brain and anatomically localize to the subfornical organ in the brain at steady state.
In humans and mice, we performed deep transcriptional and functional profiling of CNS CD4 T-cells and found that they are TH1-like.
Using mouse models, we found that CNS CD4-T-cell-derived IFNγ is required for CNS homeostasis by signaling to astrocytes.
We found that CNS T-cells are derived from both the gut and also, surprisingly, the white adipose tissue, and can be phenotypically shaped by the states of both the gut microbiota composition and the state of the fat.
Transcriptional and functional profiling across brain, white fat, and gut in mouse and humans identified potential mechanisms of how CD4 T-cells get from the gut to the brain.
In this proposal, we will identify the mechanisms by which gut microbiota and the white fat control the CD4 T-cell compartment.
The gut-brain axis is emerging as a central mediator of health and disease.
Multiple studies have associated gut microbiota composition with neuroinflammatory and neurodegenerative diseases, and several recent studies suggest trafficking of immune cells from the gut to the brain.
However, mechanistic understanding of how gut-educated T-cells get to the brain and why this axis exists at all are unclear.
We recently discovered that CD4 T-cells are present in mouse and human brain and anatomically localize to the subfornical organ in the brain at steady state.
In humans and mice, we performed deep transcriptional and functional profiling of CNS CD4 T-cells and found that they are TH1-like.
Using mouse models, we found that CNS CD4-T-cell-derived IFNγ is required for CNS homeostasis by signaling to astrocytes.
We found that CNS T-cells are derived from both the gut and also, surprisingly, the white adipose tissue, and can be phenotypically shaped by the states of both the gut microbiota composition and the state of the fat.
Transcriptional and functional profiling across brain, white fat, and gut in mouse and humans identified potential mechanisms of how CD4 T-cells get from the gut to the brain.
In this proposal, we will identify the mechanisms by which gut microbiota and the white fat control the CD4 T-cell compartment.
Awardee
Funding Goals
TO ASSIST PUBLIC AND PRIVATE NONPROFIT INSTITUTIONS AND INDIVIDUALS TO ESTABLISH, EXPAND AND IMPROVE BIOMEDICAL RESEARCH AND RESEARCH TRAINING IN INFECTIOUS DISEASES AND RELATED AREAS, TO CONDUCT DEVELOPMENTAL RESEARCH, TO PRODUCE AND TEST RESEARCH MATERIALS. TO ASSIST PUBLIC, PRIVATE AND COMMERCIAL INSTITUTIONS TO CONDUCT DEVELOPMENTAL RESEARCH, TO PRODUCE AND TEST RESEARCH MATERIALS, TO PROVIDE RESEARCH SERVICES AS REQUIRED BY THE AGENCY FOR PROGRAMS IN INFECTIOUS DISEASES, AND CONTROLLING DISEASE CAUSED BY INFECTIOUS OR PARASITIC AGENTS, ALLERGIC AND IMMUNOLOGIC DISEASES AND RELATED AREAS. PROJECTS RANGE FROM STUDIES OF MICROBIAL PHYSIOLOGY AND ANTIGENIC STRUCTURE TO COLLABORATIVE TRIALS OF EXPERIMENTAL DRUGS AND VACCINES, MECHANISMS OF RESISTANCE TO ANTIBIOTICS AS WELL AS RESEARCH DEALING WITH EPIDEMIOLOGICAL OBSERVATIONS IN HOSPITALIZED PATIENTS OR COMMUNITY POPULATIONS AND PROGRESS IN ALLERGIC AND IMMUNOLOGIC DISEASES. BECAUSE OF THIS DUAL FOCUS, THE PROGRAM ENCOMPASSES BOTH BASIC RESEARCH AND CLINICAL RESEARCH. SMALL BUSINESS INNOVATION RESEARCH (SBIR) PROGRAM EXPANDS AND IMPROVES PRIVATE SECTOR PARTICIPATION IN BIOMEDICAL RESEARCH. THE SBIR PROGRAM INTENDS TO INCREASE AND FACILITATE PRIVATE SECTOR COMMERCIALIZATION OF INNOVATIONS DERIVED FROM FEDERAL RESEARCH AND DEVELOPMENT, TO INCREASE SMALL BUSINESS PARTICIPATION IN FEDERAL RESEARCH AND DEVELOPMENT, AND TO FOSTER AND ENCOURAGE PARTICIPATION OF SOCIALLY AND ECONOMICALLY DISADVANTAGED SMALL BUSINESS CONCERNS AND WOMEN-OWNED SMALL BUSINESS CONCERNS IN TECHNOLOGICAL INNOVATION. THE SMALL BUSINESS TECHNOLOGY TRANSFER (STTR) PROGRAM STIMULATES AND FOSTERS SCIENTIFIC AND TECHNOLOGICAL INNOVATION THROUGH COOPERATIVE RESEARCH AND DEVELOPMENT CARRIED OUT BETWEEN SMALL BUSINESS CONCERNS AND RESEARCH INSTITUTIONS, TO FOSTER TECHNOLOGY TRANSFER BETWEEN SMALL BUSINESS CONCERNS AND RESEARCH INSTITUTIONS, TO INCREASE PRIVATE SECTOR COMMERCIALIZATION OF INNOVATIONS DERIVED FROM FEDERAL RESEARCH AND DEVELOPMENT, AND TO FOSTER AND ENCOURAGE PARTICIPATION OF SOCIALLY AND ECONOMICALLY DISADVANTAGED SMALL BUSINESS CONCERNS AND WOMEN-OWNED SMALL BUSINESS CONCERNS IN TECHNOLOGICAL INNOVATION. RESEARCH CAREER DEVELOPMENT AWARDS SUPPORT THE DEVELOPMENT OF SCIENTISTS DURING THE FORMATIVE STAGES OF THEIR CAREERS. INDIVIDUAL NATIONAL RESEARCH SERVICE AWARDS (NRSAS) ARE MADE DIRECTLY TO APPROVE APPLICANTS FOR RESEARCH TRAINING IN SPECIFIED BIOMEDICAL SHORTAGE AREAS. IN ADDITION, INSTITUTIONAL NATIONAL RESEARCH SERVICE AWARDS ARE MADE TO ENABLE INSTITUTIONS TO SELECT AND MAKE AWARDS TO INDIVIDUALS TO RECEIVE TRAINING UNDER THE AEGIS OF THEIR INSTITUTIONAL PROGRAM.
Grant Program (CFDA)
Awarding / Funding Agency
Place of Performance
Connecticut
United States
Geographic Scope
State-Wide
Related Opportunity
Yale Univ was awarded
Gut Microbiota & White Fat Control of CD4 T-Cell Migration
Project Grant R01AI193160
worth $4,908,988
from the National Institute of Allergy and Infectious Diseases in July 2025 with work to be completed primarily in Connecticut United States.
The grant
has a duration of 4 years and
was awarded through assistance program 93.855 Allergy and Infectious Diseases Research.
The Project Grant was awarded through grant opportunity NIH Research Project Grant (Parent R01 Clinical Trial Not Allowed).
Status
(Ongoing)
Last Modified 7/21/25
Period of Performance
7/14/25
Start Date
6/30/29
End Date
Funding Split
$4.9M
Federal Obligation
$0.0
Non-Federal Obligation
$4.9M
Total Obligated
Activity Timeline
Additional Detail
Award ID FAIN
R01AI193160
SAI Number
R01AI193160-1994177473
Award ID URI
SAI UNAVAILABLE
Awardee Classifications
Private Institution Of Higher Education
Awarding Office
75NM00 NIH National Institute of Allergy and Infectious Diseases
Funding Office
75NM00 NIH National Institute of Allergy and Infectious Diseases
Awardee UEI
FL6GV84CKN57
Awardee CAGE
4B992
Performance District
CT-90
Senators
Richard Blumenthal
Christopher Murphy
Christopher Murphy
Modified: 7/21/25